Conferences related to Phylogeny

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2012 6th International Conference on Bioinformatics and Biomedical Engineering (iCBBE)

Bioinformatics, Computational Biology, Biomedical Engineering


2012 9th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.

  • 2011 Eighth International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

    FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.

  • 2010 Seventh International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

    FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.


2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE)

The annual IEEE International Conference on Bioinformatics and Bioengineering covers complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design, and so on.

  • 2011 IEEE 11th International Conference on Bioinformatics & Bioengineering (BIBE)

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design.

  • 2010 International Conference on BioInformatics and BioEngineering (BIBE)

  • 2009 9th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design. Research and development in these two areas are impacting the science and technology in fields such as medicine, food production, forensics, etc.

  • 2008 8th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design.

  • 2007 7th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    Bioinformatics and Bioengineering are complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design, and so on. Research and development in these two areas are impacting the science and technology of fields such as medicine, food production, forensics, etc. by advancing fundamental concepts in molecular biology and in medicine ,by helping us understand living organisms.

  • 2006 IEEE Symposium on Bioinformatics and Bioengineering - BIBE

  • 2005 IEEE Symposium on Bioinformatics and Biomedical Engineering - BIBE


2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

BIBM 2012 solicits high-quality original research papers (including significant work-in-progress) in any aspect of bioinformatics, biomedicine and healthcare informatics. New computational techniques and methods in machine learning; data mining; text analysis; pattern recognition; knowledge representation; databases; data modeling; combinatorics; stochastic modeling; string and graph algorithms; linguistic methods; robotics; constraint satisfaction; data visualization; parallel computation; data integration; modeling and simulation and their application in life science domain are especially encouraged.


2011 International Conference on Bioinformatics and Computational Biology (ICBCB)

ICBCB 2011, aims to bring together researchers, scientists, engineers, and scholar students to exchange and share their experiences, new ideas, and research results about all aspects of Bioinformatics and Computational Biology, and discuss the practical challenges encountered and the solutions adopted.


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Periodicals related to Phylogeny

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Computational Biology and Bioinformatics, IEEE/ACM Transactions on

Specific topics of interest include, but are not limited to, sequence analysis, comparison and alignment methods; motif, gene and signal recognition; molecular evolution; phylogenetics and phylogenomics; determination or prediction of the structure of RNA and Protein in two and three dimensions; DNA twisting and folding; gene expression and gene regulatory networks; deduction of metabolic pathways; micro-array design and analysis; proteomics; ...


Computing in Science & Engineering

Physics, medicine, astronomy—these and other hard sciences share a common need for efficient algorithms, system software, and computer architecture to address large computational problems. And yet, useful advances in computational techniques that could benefit many researchers are rarely shared. To meet that need, Computing in Science & Engineering (CiSE) presents scientific and computational contributions in a clear and accessible format. ...


Multimedia, IEEE

IEEE Multimedia Magazine covers a broad range of issues in multimedia systems and applications. Articles, product reviews, new product descriptions, book reviews, and announcements of conferences and workshops cover topics that include hardware and software for media compression, coding and processing; media representations and standards for storage, editing, interchange, transmission and presentation; hardware platforms supporting multimedia applications; operating systems suitable ...




Xplore Articles related to Phylogeny

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Study on the Effects of Ecological Engineering for Ecological Restoration on Bacterial Community Structure by Molecular Biological Method in a Eutrophic Lake

Sheng Feng; Dinglong Li; Jianfeng Ma 2010 4th International Conference on Bioinformatics and Biomedical Engineering, 2010

Study on microbial community structure and diversity in freshwater is important for exploiting the relationship of microbial community and its habitats, predicting and monitoring the ecological changing of contaminated water habitat. The retrieval of 16SrDNA genes directly from the environment has made it possible to estimate the phylogenetic diversity of a natural bacterial community without preceding cultivation steps, which reflect ...


Inferring evolutionary history from DNA sequences

S. Kannan; T. Warnow Proceedings [1990] 31st Annual Symposium on Foundations of Computer Science, 1990

Two related problems are considered. The first is determining whether it is possible to triangulate a vertex-colored graph without introducing edges between vertices of the same color. This is related to a fundamental problem for geneticists, that of using character state information to construct evolutionary trees. The polynomial equivalence of these problems is demonstrated. An important subproblem arises when the ...


A generic and versatile architecture for inference of evolutionary trees under maximum likelihood

Nikolaos Alachiotis; Alexandros Stamatakis 2010 Conference Record of the Forty Fourth Asilomar Conference on Signals, Systems and Computers, 2010

Likelihood-based reconstruction of phylogenetic (evolutionary) trees from molecular sequence data exhibits extreme resource requirements because of the high computational cost of the phylogenetic likelihood function. We propose a dedicated computer architecture for the inference of phylogenies under the maximum likelihood criterion. Our design is sufficiently generic to support any possible input data type, that is, DNA, RNA secondary structure, or ...


Primary Study on Isolation of Cellulase from a Thermobifida and Its Enzymatic Properties

Yun Qi; Yin-Zhang Liao 2009 3rd International Conference on Bioinformatics and Biomedical Engineering, 2009

Nucleotide sequences of the 16S rRNA gene of Thermobifida (formerly Thermomonospora) Q-0 was analyzed by MEGA v.3, and the phylogenetic tree showed the relationship between different strains in Thermobifida genus. A carboxymethyl cellulase I (CMCase I) was purified by fractional ammonium sulphate precipitation and ion exchange chromatography on DEAE-Sephadex. The enzyme showed the highest activity at 60degC and pH 8.0. ...


Reconstructing the Temporal Progression of Biological Data using Cluster Spanning Trees

Ryan Eshleman; Rahul Singh IEEE Transactions on NanoBioscience, 2017

Identifying the temporal progression of a set of biological samples is crucial for comprehending the dynamics of the underlying molecular interactions. It is often also a basic step in data denoising and synchronization. Finally, identifying the progression order is crucial for problems like cell lineage identification, disease progression, tumor classification, and epidemiology and thus impacts the spectrum of disciplines spanning ...


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Educational Resources on Phylogeny

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eLearning

Study on the Effects of Ecological Engineering for Ecological Restoration on Bacterial Community Structure by Molecular Biological Method in a Eutrophic Lake

Sheng Feng; Dinglong Li; Jianfeng Ma 2010 4th International Conference on Bioinformatics and Biomedical Engineering, 2010

Study on microbial community structure and diversity in freshwater is important for exploiting the relationship of microbial community and its habitats, predicting and monitoring the ecological changing of contaminated water habitat. The retrieval of 16SrDNA genes directly from the environment has made it possible to estimate the phylogenetic diversity of a natural bacterial community without preceding cultivation steps, which reflect ...


Inferring evolutionary history from DNA sequences

S. Kannan; T. Warnow Proceedings [1990] 31st Annual Symposium on Foundations of Computer Science, 1990

Two related problems are considered. The first is determining whether it is possible to triangulate a vertex-colored graph without introducing edges between vertices of the same color. This is related to a fundamental problem for geneticists, that of using character state information to construct evolutionary trees. The polynomial equivalence of these problems is demonstrated. An important subproblem arises when the ...


A generic and versatile architecture for inference of evolutionary trees under maximum likelihood

Nikolaos Alachiotis; Alexandros Stamatakis 2010 Conference Record of the Forty Fourth Asilomar Conference on Signals, Systems and Computers, 2010

Likelihood-based reconstruction of phylogenetic (evolutionary) trees from molecular sequence data exhibits extreme resource requirements because of the high computational cost of the phylogenetic likelihood function. We propose a dedicated computer architecture for the inference of phylogenies under the maximum likelihood criterion. Our design is sufficiently generic to support any possible input data type, that is, DNA, RNA secondary structure, or ...


Primary Study on Isolation of Cellulase from a Thermobifida and Its Enzymatic Properties

Yun Qi; Yin-Zhang Liao 2009 3rd International Conference on Bioinformatics and Biomedical Engineering, 2009

Nucleotide sequences of the 16S rRNA gene of Thermobifida (formerly Thermomonospora) Q-0 was analyzed by MEGA v.3, and the phylogenetic tree showed the relationship between different strains in Thermobifida genus. A carboxymethyl cellulase I (CMCase I) was purified by fractional ammonium sulphate precipitation and ion exchange chromatography on DEAE-Sephadex. The enzyme showed the highest activity at 60degC and pH 8.0. ...


Reconstructing the Temporal Progression of Biological Data using Cluster Spanning Trees

Ryan Eshleman; Rahul Singh IEEE Transactions on NanoBioscience, 2017

Identifying the temporal progression of a set of biological samples is crucial for comprehending the dynamics of the underlying molecular interactions. It is often also a basic step in data denoising and synchronization. Finally, identifying the progression order is crucial for problems like cell lineage identification, disease progression, tumor classification, and epidemiology and thus impacts the spectrum of disciplines spanning ...


More eLearning Resources

IEEE.tv Videos

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IEEE-USA E-Books

  • Geometric Models of Protein Structure and Function Prediction

    This chapter describes how protein structures are obtained experimentally and discusses methods for computing the geometry of protein molecules. There are primarily three experimental techniques for obtaining protein structures namely, X-ray crystallography, solution nuclear magnetic resonance (NMR), and recently freeze-sample electron microscopy (cryo-EM). The geometric model of macromolecule amenable to convenient computation is an idealized model, where the shapes of atoms are approximated by three-dimensional balls. The incremental algorithm developed in can be used to compute the weighted tetrahedrization for a set of atoms of different radii. The chapter outlines the algorithm for two-dimensional unweighted Delaunay triangulation. Evolution plays central roles in shaping up the function and stability of protein molecules. The method of analyzing residue substitution rates using continuous-time Markov models and the method of surface mapping of conservation entropy and phylogeny only scratches the surface of this important issue.

  • No title

    Recent advances in development of sequencing technology has resulted in a deluge of genomic data. In order to make sense of this data, there is an urgent need for algorithms for data processing and quantitative reasoning. An emerging in silico approach, called computational genomic signatures, addresses this need by representing global species-specific features of genomes using simple mathematical models. This text introduces the general concept of computational genomic signatures, and it reviews some of the DNA sequence models which can be used as computational genomic signatures. The text takes the position that a practical computational genomic signature consists of both a model and a measure for computing the distance or similarity between models. Therefore, a discussion of sequence similarity/distance measurement in the context of computational genomic signatures is presented. The remainder of the text covers various applications of computational genomic signatures in the areas o metagenomics, phylogenetics and the detection of horizontal gene transfer. Table of Contents: Genome Signatures, Definition and Background / Other Computational Characterizations as Genome Signatures / Measuring Distance of Biological Sequences Using Genome Signatures / Applications: Phylogeny Construction / Applications: Metagenomics / Applications: Horizontal DNA Transfer Detection

  • Development and Learning

    This chapter contains sections titled: 6.1 Development, 6.2 Phylogeny vs. Ontogeny, 6.3 Development from the Perspective of Psychology, 6.4 Conclusions

  • Emotions

    This chapter contains sections titled: 10.1 Triune Phylogeny, 10.2 Emotions and the Body, 10.3 Somatic Marker Theory, 10.4 The Amygdala' s Special Role, 10.5 Computational Perspectives, 10.6 Summary

  • The Architecture of Complexity: Hierarchic Systems

    This chapter contains sections titled: Hierarchic Systems, Social Systems, Biological and Physical Systems, Symbolic Systems, The Evolution of Complex Systems, Biological Evolution, Evolution of Multi-Cellular Organisms, Problem Solving as Natural Selection, The Sources of Selectivity, On Empires and Empire Building, Conclusion: The Evolutionary Explanation of Hierarchy, Nearly Decomposable Systems, Near Decomposability of Social Systems, Physicochemical Systems, Some Observations on Hierarchic Span, Summary: Near Decomposability, Biological Evolution Revisited, The Description of Complexity, Near Decomposability and Comprehensibility, Simple Descriptions of Complex Systems, State Descriptions and Process Descriptions, The Description of Complexity in Self-Reproducing Systems, Ontogeny Recapitulates Phylogeny, Summary: The Description of Complexity, Conclusion



Standards related to Phylogeny

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Jobs related to Phylogeny

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