Conferences related to Phylogeny

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2012 6th International Conference on Bioinformatics and Biomedical Engineering (iCBBE)

Bioinformatics, Computational Biology, Biomedical Engineering


2012 9th International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.

  • 2011 Eighth International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

    FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.

  • 2010 Seventh International Conference on Fuzzy Systems and Knowledge Discovery (FSKD)

    FSKD is an international forum on fuzzy systems and knowledge discovery. Specific topics include fuzzy theory and foundations; stability of fuzzy systems; fuzzy methods and algorithms; fuzzy image, speech and signal processing; multimedia; fuzzy hardware and architectures; data mining.


2012 IEEE 12th International Conference on Bioinformatics & Bioengineering (BIBE)

The annual IEEE International Conference on Bioinformatics and Bioengineering covers complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design, and so on.

  • 2011 IEEE 11th International Conference on Bioinformatics & Bioengineering (BIBE)

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design.

  • 2010 International Conference on BioInformatics and BioEngineering (BIBE)

  • 2009 9th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design. Research and development in these two areas are impacting the science and technology in fields such as medicine, food production, forensics, etc.

  • 2008 8th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    The annual IEEE International Conference on Bioinformatics and Bioengineering aims at building synergy between Bioinformatics and Bioengineering, two complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design.

  • 2007 7th IEEE International Conference on BioInformatics and BioEngineering - BIBE

    Bioinformatics and Bioengineering are complementary disciplines that hold great promise for the advancement of research and development in complex medical and biological systems, agriculture, environment, public health, drug design, and so on. Research and development in these two areas are impacting the science and technology of fields such as medicine, food production, forensics, etc. by advancing fundamental concepts in molecular biology and in medicine ,by helping us understand living organisms.

  • 2006 IEEE Symposium on Bioinformatics and Bioengineering - BIBE

  • 2005 IEEE Symposium on Bioinformatics and Biomedical Engineering - BIBE


2012 IEEE International Conference on Bioinformatics and Biomedicine (BIBM)

BIBM 2012 solicits high-quality original research papers (including significant work-in-progress) in any aspect of bioinformatics, biomedicine and healthcare informatics. New computational techniques and methods in machine learning; data mining; text analysis; pattern recognition; knowledge representation; databases; data modeling; combinatorics; stochastic modeling; string and graph algorithms; linguistic methods; robotics; constraint satisfaction; data visualization; parallel computation; data integration; modeling and simulation and their application in life science domain are especially encouraged.


2011 International Conference on Bioinformatics and Computational Biology (ICBCB)

ICBCB 2011, aims to bring together researchers, scientists, engineers, and scholar students to exchange and share their experiences, new ideas, and research results about all aspects of Bioinformatics and Computational Biology, and discuss the practical challenges encountered and the solutions adopted.


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Periodicals related to Phylogeny

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Computational Biology and Bioinformatics, IEEE/ACM Transactions on

Specific topics of interest include, but are not limited to, sequence analysis, comparison and alignment methods; motif, gene and signal recognition; molecular evolution; phylogenetics and phylogenomics; determination or prediction of the structure of RNA and Protein in two and three dimensions; DNA twisting and folding; gene expression and gene regulatory networks; deduction of metabolic pathways; micro-array design and analysis; proteomics; ...


Computing in Science & Engineering

Physics, medicine, astronomy—these and other hard sciences share a common need for efficient algorithms, system software, and computer architecture to address large computational problems. And yet, useful advances in computational techniques that could benefit many researchers are rarely shared. To meet that need, Computing in Science & Engineering (CiSE) presents scientific and computational contributions in a clear and accessible format. ...


Multimedia, IEEE

IEEE Multimedia Magazine covers a broad range of issues in multimedia systems and applications. Articles, product reviews, new product descriptions, book reviews, and announcements of conferences and workshops cover topics that include hardware and software for media compression, coding and processing; media representations and standards for storage, editing, interchange, transmission and presentation; hardware platforms supporting multimedia applications; operating systems suitable ...




Xplore Articles related to Phylogeny

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RNA Secondary Structure and Sequence Variability of the 3' End of Strawberry Mild Yellow Edge Virus Genome

Lili Li; Hong-Yi Yang 2009 3rd International Conference on Bioinformatics and Biomedical Engineering, 2009

The specific segment in 3' terminal region of strawberry mild yellow edge virus (SMYEV) genome was amplified by 3' rapid amplification of cDNA ends (RACE). Ten Chinese isolates were sequenced. Sequence analysis of coat protein gene showed nucleotide and deduced amino acid identities ranged from 76.8 to 100% and 86.4 to 100%, respectively. Phylogenetic analysis showed that all isolates of ...


Scalable malware forensics using phylogenetic analysis

Steven Jilcott 2015 IEEE International Symposium on Technologies for Homeland Security (HST), 2015

Malware forensics analysts confront one of our biggest homeland security challenges - a continuing flood of new malware variants released by adaptable adversaries seeking new targets in cyberspace, exploiting new technologies, and bypassing existing security mechanisms. Reverse engineering new samples, understanding their capabilities, and ascertaining provenance is time- intensive and requires considerable human expertise. We present DECODE, a prototype malware ...


ATreeGrep: approximate searching in unordered trees

D. Shasha; J. T. L. Wang; Huiyuan Shan; Kaizhong Zhang Proceedings 14th International Conference on Scientific and Statistical Database Management, 2002

An unordered labeled tree is a tree in which each node has a string label and the parent-child relationship is significant, but the order among siblings is unimportant. This paper presents an approach to the nearest neighbor search problem for these trees. Given a database D of unordered labeled trees and a query tree Q, the goal is to find ...


Molecular evolutionary phylogenetic trees based on minimum description length principle

F. Ren; H. Tanaka; N. Fukuda; T. Gojobori Proceedings of the Twenty-Eighth Annual Hawaii International Conference on System Sciences, 1995

Ever since the discovery of a molecular clock, many methods have been, developed to reconstruct the molecular evolutionary phylogenetic trees. We deal with this problem from the viewpoint of an inductive inference and apply J. Rissanen's (1986) minimum description length principle to extract the minimum complexity phylogenetic tree. Our method describes the complexity of molecular phylogenetic tree by three terms ...


Comparison of Galled Trees

Gabriel Cardona; Merce Llabres; Francesc Rossello; Gabriel Valiente IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011

Galled trees, directed acyclic graphs that model evolutionary histories with isolated hybridization events, have become very popular due to both their biological significance and the existence of polynomial-time algorithms for their reconstruction. In this paper, we establish to which extent several distance measures for the comparison of evolutionary networks are metrics for galled trees, and hence, when they can be ...


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Educational Resources on Phylogeny

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eLearning

RNA Secondary Structure and Sequence Variability of the 3' End of Strawberry Mild Yellow Edge Virus Genome

Lili Li; Hong-Yi Yang 2009 3rd International Conference on Bioinformatics and Biomedical Engineering, 2009

The specific segment in 3' terminal region of strawberry mild yellow edge virus (SMYEV) genome was amplified by 3' rapid amplification of cDNA ends (RACE). Ten Chinese isolates were sequenced. Sequence analysis of coat protein gene showed nucleotide and deduced amino acid identities ranged from 76.8 to 100% and 86.4 to 100%, respectively. Phylogenetic analysis showed that all isolates of ...


Scalable malware forensics using phylogenetic analysis

Steven Jilcott 2015 IEEE International Symposium on Technologies for Homeland Security (HST), 2015

Malware forensics analysts confront one of our biggest homeland security challenges - a continuing flood of new malware variants released by adaptable adversaries seeking new targets in cyberspace, exploiting new technologies, and bypassing existing security mechanisms. Reverse engineering new samples, understanding their capabilities, and ascertaining provenance is time- intensive and requires considerable human expertise. We present DECODE, a prototype malware ...


ATreeGrep: approximate searching in unordered trees

D. Shasha; J. T. L. Wang; Huiyuan Shan; Kaizhong Zhang Proceedings 14th International Conference on Scientific and Statistical Database Management, 2002

An unordered labeled tree is a tree in which each node has a string label and the parent-child relationship is significant, but the order among siblings is unimportant. This paper presents an approach to the nearest neighbor search problem for these trees. Given a database D of unordered labeled trees and a query tree Q, the goal is to find ...


Molecular evolutionary phylogenetic trees based on minimum description length principle

F. Ren; H. Tanaka; N. Fukuda; T. Gojobori Proceedings of the Twenty-Eighth Annual Hawaii International Conference on System Sciences, 1995

Ever since the discovery of a molecular clock, many methods have been, developed to reconstruct the molecular evolutionary phylogenetic trees. We deal with this problem from the viewpoint of an inductive inference and apply J. Rissanen's (1986) minimum description length principle to extract the minimum complexity phylogenetic tree. Our method describes the complexity of molecular phylogenetic tree by three terms ...


Comparison of Galled Trees

Gabriel Cardona; Merce Llabres; Francesc Rossello; Gabriel Valiente IEEE/ACM Transactions on Computational Biology and Bioinformatics, 2011

Galled trees, directed acyclic graphs that model evolutionary histories with isolated hybridization events, have become very popular due to both their biological significance and the existence of polynomial-time algorithms for their reconstruction. In this paper, we establish to which extent several distance measures for the comparison of evolutionary networks are metrics for galled trees, and hence, when they can be ...


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IEEE.tv Videos

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IEEE-USA E-Books

  • Geometric Models of Protein Structure and Function Prediction

    This chapter describes how protein structures are obtained experimentally and discusses methods for computing the geometry of protein molecules. There are primarily three experimental techniques for obtaining protein structures namely, X-ray crystallography, solution nuclear magnetic resonance (NMR), and recently freeze-sample electron microscopy (cryo-EM). The geometric model of macromolecule amenable to convenient computation is an idealized model, where the shapes of atoms are approximated by three-dimensional balls. The incremental algorithm developed in can be used to compute the weighted tetrahedrization for a set of atoms of different radii. The chapter outlines the algorithm for two-dimensional unweighted Delaunay triangulation. Evolution plays central roles in shaping up the function and stability of protein molecules. The method of analyzing residue substitution rates using continuous-time Markov models and the method of surface mapping of conservation entropy and phylogeny only scratches the surface of this important issue.

  • The Architecture of Complexity: Hierarchic Systems

    This chapter contains sections titled: Hierarchic Systems, Social Systems, Biological and Physical Systems, Symbolic Systems, The Evolution of Complex Systems, Biological Evolution, Evolution of Multi-Cellular Organisms, Problem Solving as Natural Selection, The Sources of Selectivity, On Empires and Empire Building, Conclusion: The Evolutionary Explanation of Hierarchy, Nearly Decomposable Systems, Near Decomposability of Social Systems, Physicochemical Systems, Some Observations on Hierarchic Span, Summary: Near Decomposability, Biological Evolution Revisited, The Description of Complexity, Near Decomposability and Comprehensibility, Simple Descriptions of Complex Systems, State Descriptions and Process Descriptions, The Description of Complexity in Self-Reproducing Systems, Ontogeny Recapitulates Phylogeny, Summary: The Description of Complexity, Conclusion

  • No title

    Recent advances in development of sequencing technology has resulted in a deluge of genomic data. In order to make sense of this data, there is an urgent need for algorithms for data processing and quantitative reasoning. An emerging in silico approach, called computational genomic signatures, addresses this need by representing global species-specific features of genomes using simple mathematical models. This text introduces the general concept of computational genomic signatures, and it reviews some of the DNA sequence models which can be used as computational genomic signatures. The text takes the position that a practical computational genomic signature consists of both a model and a measure for computing the distance or similarity between models. Therefore, a discussion of sequence similarity/distance measurement in the context of computational genomic signatures is presented. The remainder of the text covers various applications of computational genomic signatures in the areas o metagenomics, phylogenetics and the detection of horizontal gene transfer. Table of Contents: Genome Signatures, Definition and Background / Other Computational Characterizations as Genome Signatures / Measuring Distance of Biological Sequences Using Genome Signatures / Applications: Phylogeny Construction / Applications: Metagenomics / Applications: Horizontal DNA Transfer Detection

  • Development and Learning

    This chapter contains sections titled: 6.1 Development, 6.2 Phylogeny vs. Ontogeny, 6.3 Development from the Perspective of Psychology, 6.4 Conclusions

  • Emotions

    This chapter contains sections titled: 10.1 Triune Phylogeny, 10.2 Emotions and the Body, 10.3 Somatic Marker Theory, 10.4 The Amygdala' s Special Role, 10.5 Computational Perspectives, 10.6 Summary



Standards related to Phylogeny

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Jobs related to Phylogeny

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