Conferences related to DNA Sequencing

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2018 Fourth International Conference on Information Retrieval and Knowledge Management (CAMP)

Theory, development, application and experience, gained through experimentation or reasoned analogies in information retrieval and knowledge management

  • 2016 Third International Conference on Information Retrieval and Knowledge Management (CAMP)

    Theory, development, application, and experience, gained through experimentation or reasoned analogies in information retrieval and knowledge management

  • 2012 International Conference on Information Retrieval & Knowledge Management (CAMP)

    INFORMATION RETRIEVAL IR Theory and Formal Models Cross-language retrieval, Multilingual retrieval, Machine translation for IR Web IR and Social media search Semi-structured information retrieval and Semantic search Interactive IR, Task-based IR User studies and models, User interfaces and visualization Multimedia IR KNOWLEDGE MANAGEMENT Knowledge engineering Digital Libraries, enterprise search, intranet search, and desktop search Social network Knowledge Intelligence Knowledge and privacy Knowledge synthesis and visualization Web and Social Knowledge Management Metadata and structured documents COMPUTATIONAL LINGUISTIC Text representation, text analysis, text summarization Collaborative filtering Text Categorization Text Clustering Question answering, Lexical acquisition Dialog System Machine Translation

  • 2010 International Conference on Information Retrieval & Knowledge Management (CAMP)

    CAMP'10 is an international scientific conference for research in the field of information retrieval and knowledge management. Information retrieval is the art and science of retrieving from a collection of items a subset that serves the user s purpose. While, knowledge management comprises a range of practices used in an organization to identify, create, represent, distribute and enable adoption of insights and experiences. The two areas intertwined as information retrieval provides means of knowledge i


2018 IEEE Statistical Signal Processing Workshop (SSP)

SSP 2018 is the 20th in a series of unique meetings that bring members of the IEEE Signal Processing Society together with researchers from allied fields such as bioinformatics, communications, machine learning, and statistics. The scope of the workshop includes basic theory, methods and algorithms, and applications. SSP is a single-track workshop that includes invited talks, demonstrations and oral and poster presentations of refereed papers.


2018 IEEE-EMBS Conference on Biomedical Engineering and Sciences (IECBES)

IECBES is a series of bi-annual conference since 2010. The conference will provide excellent platform for knowledge exchange between researchers, scientists, academicians and engineers working in the areas of biomedical engineering. It is open for local and international participants.

  • 2016 IEEE EMBS Conference on Biomedical Engineering and Sciences (IECBES)

    IECBES is the flagship conference of EMB Malaysia Chapter. Its scope includes new findings in research areas of Biomedical Engineering with keywords indicated above.

  • 2014 IEEE Conference on Biomedical Engineering and Sciences (IECBES)

    Biomedical Signal and Image Processing:Cardiovascular, Respiratory, Neural, Biomedical Instrumentation & Devices: Sensor, Micro / Nano / Wearable Technology,Biomaterial, Biomimetics, Rehabilitation andTherapeutic Health System, Biomedical Modeling and Simulation, Bioinformatics, Biomechanics and medical robotics, Ergonomics & Human Factors,Healthcare Information System, Telemedicine, eHealth, myHealth.

  • 2012 IEEE EMBS Conference on Biomedical Engineering and Sciences (IECBES 2012)

    Biomedical Signal and Image Processing:Cardiovascular, Respiratory, Neural, Biomedical Instrumentation & Devices: Sensor, Micro / Nano / Wearable Technology,Biomaterial, Biomimetics, Rehabilitation and Therapeutic Health System, Biomedical Modeling and Simulation, Bioinformatics, Biomechanics and medical robotics, Ergonomics & Human Factors,Healthcare Information System, Telemedicine, eHealth, myHealth.

  • 2010 IEEE EMBS Conference on Biomedical Engineering and Sciences (IECBES)

    Biomedical Signal and Image Processing: Cardiovascular, Respiratory, Neural Biomedical Instrumentation & Devices: Sensor, micro/ nano/wearable technology, biomaterial, biomimetic Rehabilitation and Therapeutic Health System Biomedical Modelling and Simulation Bioinformatics Biomechanics and medical robotics Healthcare Information System: Telemedicine, eHealth, mHealth


2017 10th International Symposium on Computational Intelligence and Design (ISCID)

Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation, Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems and other similar computational models. The application of computational intelligence techniques into industrial design, interactive design, media design, and engineering design are also within the scope.

  • 2016 9th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation, Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems and other similar computational models.

  • 2015 8th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation,Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems andother similar computational models.

  • 2014 7th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation,Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems andother similar computational models.

  • 2013 6th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation, Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems and other similar computational models.

  • 2012 5th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation, Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems and other similar computational models.

  • 2011 4th International Symposium on Computational Intelligence and Design (ISCID)

    Computational Intelligence techniques typically include Fuzzy Logic, Evolutionary Computation, Intelligent Agent Systems, Neural Networks, Cellular Automata, Artificial Immune Systems and other similar computational models. Computational Intelligence constitutes an umbrella of techniques, has proven to be flexible in decision making in dynamic environment.

  • 2010 3rd International Symposium on Computational Intelligence and Design (ISCID)

    ISCID 2010 will be held at Hangzhou, China in 29-31, October 2010. It provides researchers and practitioners interested in new information technologies an opportunity to highlight innovative research directions, novel applications, and a growing number of relationships between rough sets and such are as computational intelligence, knowledge discovery and design.

  • 2009 2nd International Symposium on Computational Intelligence and Design (ISCID)

    This symposium provide researchers and practitioners interested in new information technologies an opportunity to highlight innovative research directions, novel applications, and a growing number of relationships between rough sets and such areas as computational intelligence, knowledge discovery and data mining, non-conventional models of computation and design.

  • 2008 International Symposium on Computational Intelligence and Design (ISCID)

    computational intelligence, knowledge discovery and data mining, intelligent information systems, web mining, synthesis and analysis of complex objects , non-conventional models of computation and Industrial Design.


2017 12th International Conference on Computer Science and Education (ICCSE)

Annual Topics• Big Data • Cloud Computing • Robotics• Internet of Things • Recommendation System• Web Applications• Telemedicine• Massive Open Online CoursesComputer Science• Artificial Intelligence• Software Engineering• Database Technology • Computer Graphics• Computer Application • Control Technology• Systems Engineering • Communication TechnologyEngineering Education• Education Reform and Innovation• Engineering Education Mode• Curricula and Courseware Design • Engineering Training• Life-long Education• Computer Education for Special GroupCross Disciplinary• Mechatronics• Automation• Bio-inspired Engineering

  • 2016 11th International Conference on Computer Science & Education (ICCSE)

    Since 2006, the International Conference on Computer Science and Education (ICCSE) has been held in Xiamen, Wuhan, Kaifeng, Nanning, Hefei, Singapore, Melbourne, Colombo, Vancouver, and Cambridge for ten sessions.The 11th International Conference on Computer Science & Education (ICCSE 2016) will be held in Nagoya University, Nagoya, Japan at August 23-26, 2016, and organized by National Research Council of Computer Education in Colleges & Universities, China (CRC-CE), and technically co-sponsored by the IEEE Nagoya Section.Many internationally renowned experts and IEEE Fellows from the fields of computer, education and control have made brilliant speeches. The visitants and participants include many experts, academics, scientists, technicians and engineers from many well-known domestic and foreign institutions of higher learning, researches and enterprises. These make the conference become a good platform for internationally academic communication.

  • 2015 10th International Conference on Computer Science & Education (ICCSE)

    IEEE CCSE 2015 Topics of interest include:Annual Selected Topics-- Big Data-- Cloud Computing-- Robotics-- Internet of Things-- Recommendation System-- Web Applications-- Telemedicine-- Massive Open Online CoursesComputer Science-- Artificial Intelligence-- Software Engineering-- Database Technology-- Computer Graphics-- Computer Application-- Control Technology-- Systems Engineering-- Communication TechnologyEngineering Education-- Education Reform and Innovation-- Engineering Education Mode-- Curricula and Courseware Design-- Engineering Training-- Life-long Education-- Computer Education for Special GroupInterdisciplinary-- Mechatronics-- Automation-- Bio-inspired Engineering-- Energy Efficiency-- Uncertainty Quantification

  • 2014 9th International Conference on Computer Science & Education (ICCSE)

    ICCSE is an annual conference, to provide more chances for communication of researchers and educators.

  • 2013 8th International Conference on Computer Science & Education (ICCSE)

    Annual selected topics including cloud computing, internet of things, big data, recommendation system, green communication and web application etc. It also covers the topics of interaction between engineering education and computer science.

  • 2012 7th International Conference on Computer Science & Education (ICCSE 2012)

    Annual selected topics including cloud computing, internet of things, recommendation system, green communication and web application etc. It also covers the topics of interaction between engineering education and computer science.

  • 2011 6th International Conference on Computer Science & Education (ICCSE 2011)

    Computer Science: Database Technology, Artificial Intelligence, Computer Architecture, Software Engineering, Computer Graphics, Computer Application, Control Technology, Systems Engineering, Network Technology, Communication Technology, Web Applications. Computer Education.

  • 2010 5th International Conference on Computer Science & Education (ICCSE 2010)

    The main areas addressed by the conference included: (1)Computer Science: Database Technology, Artificial Intelligence, Computer architecture, Software engineering, Computer Graphics, Computer Application , Control Technology, Systems Engineering, Network Technology, Communication Technology 2) Computer Education.

  • 2009 4th International Conference on Computer Science & Education (ICCSE 2009)

    The main areas addressed by the conference included: (1)Computer Science: Database Technology, Artificial Intelligence, Computer architecture, Software engineering, Computer Graphics, Computer Application , Control Technology, Systems Engineering, Network Technology, Communication Technology 2) Computer Education.


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Periodicals related to DNA Sequencing

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Automation Science and Engineering, IEEE Transactions on

The IEEE Transactions on Automation Sciences and Engineering (T-ASE) publishes fundamental papers on Automation, emphasizing scientific results that advance efficiency, quality, productivity, and reliability. T-ASE encourages interdisciplinary approaches from computer science, control systems, electrical engineering, mathematics, mechanical engineering, operations research, and other fields. We welcome results relevant to industries such as agriculture, biotechnology, healthcare, home automation, maintenance, manufacturing, pharmaceuticals, retail, ...


Computational Biology and Bioinformatics, IEEE/ACM Transactions on

Specific topics of interest include, but are not limited to, sequence analysis, comparison and alignment methods; motif, gene and signal recognition; molecular evolution; phylogenetics and phylogenomics; determination or prediction of the structure of RNA and Protein in two and three dimensions; DNA twisting and folding; gene expression and gene regulatory networks; deduction of metabolic pathways; micro-array design and analysis; proteomics; ...


Computer

Computer, the flagship publication of the IEEE Computer Society, publishes peer-reviewed technical content that covers all aspects of computer science, computer engineering, technology, and applications. Computer is a resource that practitioners, researchers, and managers can rely on to provide timely information about current research developments, trends, best practices, and changes in the profession.


Computers, IEEE Transactions on

Design and analysis of algorithms, computer systems, and digital networks; methods for specifying, measuring, and modeling the performance of computers and computer systems; design of computer components, such as arithmetic units, data storage devices, and interface devices; design of reliable and testable digital devices and systems; computer networks and distributed computer systems; new computer organizations and architectures; applications of VLSI ...


Electron Devices, IEEE Transactions on

Publishes original and significant contributions relating to the theory, design, performance and reliability of electron devices, including optoelectronics devices, nanoscale devices, solid-state devices, integrated electronic devices, energy sources, power devices, displays, sensors, electro-mechanical devices, quantum devices and electron tubes.


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Xplore Articles related to DNA Sequencing

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From the DNA Sequencer to a Sequence Assembly

James Bonfield 2006 IET Seminar on Signal Processing for Genomics, 2006

Modern DNA sequencing instruments produce a variety of raw and processed output formats. Traditional Sanger style sequencing is well represented by the ABI sequencing instruments and so this is where most of the talk with be focused, however new emerging technologies from 454 Life Sciences and Solexa are discussed briefly too. It is not the aim to provide in-depth information ...


Hardware Acceleration of Short Read Mapping

Corey B. Olson; Maria Kim; Cooper Clauson; Boris Kogon; Carl Ebeling; Scott Hauck; Walter L. Ruzzo 2012 IEEE 20th International Symposium on Field-Programmable Custom Computing Machines, 2012

Bioinformatics is an emerging field with seemingly limitless possibilities for advances in numerous areas of research and applications. We propose a scalable FPGA-based solution to the short read mapping problem in DNA sequencing, which greatly accelerates the task of aligning short length reads to a known reference genome. We compare the runtime, power consumption, and sensitivity of the hardware system ...


Spaced seed data structures

Inanç Birol; Hamid Mohamadi; Anthony Raymond; Karthika Raghavan; Justin Chu; Benjamin P Vandervalk; Shaun D Jackman; René L Warren 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2014

This past decade, genome sciences have benefitted from rapid advances in DNA sequencing technologies, and development of efficient algorithms for processing short nucleotide sequences played a key role in enabling their uptake in the field. In particular, reassembly of human genomes (de novo or reference-guided) from short DNA sequence reads had a substantial impact on health research. De novo assembly ...


Base calling error rates in next-generation DNA sequencing

Manohar Shamaiah; Haris Vikalo 2012 IEEE Statistical Signal Processing Workshop (SSP), 2012

We study the problem of base calling in next-generation DNA sequencing platforms that rely on reversible terminator chemistry. After reviewing a statistical model of the generated signal and the Viterbi algorithm for finding the maximum-likelihood solution to the base calling problem, we present a closed form expression for the upper bound on the probability of base calling error. Simulation results ...


Workshop: Characterization of structural variants with next generation DNA sequencing

Benjamin Raphael; Suzanne Sindi; Anna Ritz; Ali Bashir 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 2011

Algorithms for structural variant identification from paired reads and from strobe reads are introduced. For paired reads, GASV+CC and GASV-Prob are designed. Each of these is built on the established Geometric Analysis of Structural Variants (GASV) program that precisely localizes the breakpoints of variants. GASV+CC combines read depth and paired reads analysis. GASV-Prob also includes paired reads with multiple possible ...


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Educational Resources on DNA Sequencing

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eLearning

From the DNA Sequencer to a Sequence Assembly

James Bonfield 2006 IET Seminar on Signal Processing for Genomics, 2006

Modern DNA sequencing instruments produce a variety of raw and processed output formats. Traditional Sanger style sequencing is well represented by the ABI sequencing instruments and so this is where most of the talk with be focused, however new emerging technologies from 454 Life Sciences and Solexa are discussed briefly too. It is not the aim to provide in-depth information ...


Hardware Acceleration of Short Read Mapping

Corey B. Olson; Maria Kim; Cooper Clauson; Boris Kogon; Carl Ebeling; Scott Hauck; Walter L. Ruzzo 2012 IEEE 20th International Symposium on Field-Programmable Custom Computing Machines, 2012

Bioinformatics is an emerging field with seemingly limitless possibilities for advances in numerous areas of research and applications. We propose a scalable FPGA-based solution to the short read mapping problem in DNA sequencing, which greatly accelerates the task of aligning short length reads to a known reference genome. We compare the runtime, power consumption, and sensitivity of the hardware system ...


Spaced seed data structures

Inanç Birol; Hamid Mohamadi; Anthony Raymond; Karthika Raghavan; Justin Chu; Benjamin P Vandervalk; Shaun D Jackman; René L Warren 2014 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2014

This past decade, genome sciences have benefitted from rapid advances in DNA sequencing technologies, and development of efficient algorithms for processing short nucleotide sequences played a key role in enabling their uptake in the field. In particular, reassembly of human genomes (de novo or reference-guided) from short DNA sequence reads had a substantial impact on health research. De novo assembly ...


Base calling error rates in next-generation DNA sequencing

Manohar Shamaiah; Haris Vikalo 2012 IEEE Statistical Signal Processing Workshop (SSP), 2012

We study the problem of base calling in next-generation DNA sequencing platforms that rely on reversible terminator chemistry. After reviewing a statistical model of the generated signal and the Viterbi algorithm for finding the maximum-likelihood solution to the base calling problem, we present a closed form expression for the upper bound on the probability of base calling error. Simulation results ...


Workshop: Characterization of structural variants with next generation DNA sequencing

Benjamin Raphael; Suzanne Sindi; Anna Ritz; Ali Bashir 2011 IEEE 1st International Conference on Computational Advances in Bio and Medical Sciences (ICCABS), 2011

Algorithms for structural variant identification from paired reads and from strobe reads are introduced. For paired reads, GASV+CC and GASV-Prob are designed. Each of these is built on the established Geometric Analysis of Structural Variants (GASV) program that precisely localizes the breakpoints of variants. GASV+CC combines read depth and paired reads analysis. GASV-Prob also includes paired reads with multiple possible ...


More eLearning Resources

IEEE-USA E-Books

  • Index

    Real-world problems and modern optimization techniques to solve them Here, a team of international experts brings together core ideas for solving complex problems in optimization across a wide variety of real-world settings, including computer science, engineering, transportation, telecommunications, and bioinformatics. Part One—covers methodologies for complex problem solving including genetic programming, neural networks, genetic algorithms, hybrid evolutionary algorithms, and more. Part Two—delves into applications including DNA sequencing and reconstruction, location of antennae in telecommunication networks, metaheuristics, FPGAs, problems arising in telecommunication networks, image processing, time series prediction, and more. All chapters contain examples that illustrate the applications themselves as well as the actual performance of the algorithms.?Optimization Techniques for Solving Complex Problems is a valuable resource for pract tioners and researchers who work with optimization in real-world settings.

  • Evolutionary Optimization of A Neural Network-Based Signal Processor for Photometric Data from An Automated DNA Sequencer

    We are using signal conditioning neural networks to improve DNA sequencing. In the course of exploring how to improve the efficiency of these neural networks we have looked at evolutionary computation as a method of optimization. This paper explores genetic algorithms as a means of discovering large arrays of real numbers such as those found in a neural network weight matrix. A new genetic component, the intron, is introduced as a way of preserving genetic variability in the presence of higher crossover and mutation rates. However, the introduction of introns into a representational architecture increases the length of the chromosome. A method for systematically exploring the changing chromosomal length and how that influences the genetic algorithms control parameters is discussed in terms of a simulated problem. Finally, a photometric perceptron-signal filter is evolved using the best parameters discovered during the course of this research.

  • Wiley Series on Parallel and Distributed Computing

    Real-world problems and modern optimization techniques to solve them Here, a team of international experts brings together core ideas for solving complex problems in optimization across a wide variety of real-world settings, including computer science, engineering, transportation, telecommunications, and bioinformatics. Part One—covers methodologies for complex problem solving including genetic programming, neural networks, genetic algorithms, hybrid evolutionary algorithms, and more. Part Two—delves into applications including DNA sequencing and reconstruction, location of antennae in telecommunication networks, metaheuristics, FPGAs, problems arising in telecommunication networks, image processing, time series prediction, and more. All chapters contain examples that illustrate the applications themselves as well as the actual performance of the algorithms.?Optimization Techniques for Solving Complex Problems is a valuable resource for pract tioners and researchers who work with optimization in real-world settings.

  • The Engineers and Scientists of Concurrent Engineering

    This chapter contains sections titled: Frederick Sanger: Protein and DNA Sequencing, 1951, Max Perutz--Crystallographer, Their Own Words: Interviews about Concurrent Engineering, Common Features: Inventor, Multidisciplinary Team, Compressed Time Frame

  • Metaheuristics in Bioinformatics: DNA Sequencing and Reconstruction

    This chapter contains sections titled: Introduction Metaheuristics and Bioinformatics DNA Fragment Assembly Problem Shortest Common Supersequence Problem Conclusions References



Standards related to DNA Sequencing

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Jobs related to DNA Sequencing

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